>Bacillus
-------UUUG-GUGAUG-AUGGCAGAG-AGGUCACACCCGUUCCCAUACCGAACA-CGG
AAGUUAAG-CUCUC-----UAGCGCCGA----UGGUAGUUGGGACCUUGUC--CCUGUGA
GA-GUAGG-ACGUCGCCAAG---C---
>Campylobacter
AUGU--C----CGUGAU-UAUAC-AGAUGUGGAAACGCCUUGCUCCAUCCCGAACC-AAG
AAGCUAAG-CACAU----CGUGGGU-GAUGA-UACUACGCCUUACUGGCAG----GGGGA
AA-GUAGC-UCAUUGC----GGACU-U
>Candida
-GGU-------UGCGGCC-AUAUCUAGCA-GAAAGCACC-GUUCCCCGUUCGAUCAACCG
UAGUUAAG-CUGC-----UAAGAGCAAUACC-GAGUAGUGUAGUGGGAGACCAUACGCGA
AAC-UAUU-GUGCUGCAA----UC--U
>Cryptosporidium
--GCA------AUCGGCC-AUACUACAUC-GAAUAUACCGGAUCCCA-UCAGAACU-CCG
AAGUCAAG-CGGU-----GUAAGGUUC-GGU-UAGUACUAGGGUGGGGGACCACCUGGGA
AGACCAGA-AUGUCGAUC-GCCUC---
>Euglena
--GAG------UACGGCC-AUACUACCG-GGAAUACACCUGAACCCG-UUCGAUUU-CAG
AAGUUAAG-CCGG-----GUUAGGCCC-AGU-UAGUACUGAGU-GGGCGACCACUUGGGA
AC-ACUGG-GUGCUGUA----CGCU-U
>Flavobacterium
-------UAA-GGUGGUU-AUUGCGGCG-GGGCUCGACCUCUUCCCAUCCCGAACA-GAG
UAGUUAAG-CCCGC-----CUGCGCAGA----UGGUACUGCA----GUUAU---GUGGGA
GA-GUAUG-UCGUCGCCU---UUC---
>Halorubrum
--GUA------GGCGGCC-AAAGCGGCA-GGGAAAGACCCGUACCCAUUCCGAACA-CGG
AAGUGAAG-CCUGC-----CAGCGUACCAGC-UAGUACUGGAGUGGGAGACCCUCUGGGA
G-CGCUGGUUCGCCGCC----UACU-C
>Nanoarchaeum
--GUUUCGUGGGAGGGCC-AUAGCGGCCCGGGAACCACCCGUACCCAUCUCGAACA-CGG
AAGUUAAG-CCGG-----GCCGCGUCCCGAG-UGGUACUGC--CCCGCGAAGGGGUGGGA
AGCUC-GGGAUGC----------C--C
>Nosema
--GAU-------ACGGUU-AUAUUUACU-GAAAACCACCGGAACCCA-UCAGAACU-CCG
AAGUUAAA-CCAGU-----AUGAGCUU-AAU-UAGUACUAAGAAGGGAGACCACUUGGGA
AC---------GUUGGGU-GGUA----
>Thermococcus
--GG---UACG-GCGGUC-AUAGCGGCG-GGGUCACACCCGGUCUCGUUUCGACCC-CGG
AAGUUAAG-CCCGC-----CAGCGAUCCCGG-UUGUACUGCCCUCCGGGAGGGGGCGGGA
ACC--GGGGACGCCGCC-GGCCAC---
>Thermoplasma
--GG--CAA----CGGUC-AUAGCAGCA-GGGAAACACCAGAUCCCAUUCCGAACU-CGA
CGGUUAAG-CCUGC------UGCGUAUUGCG-UUGUACUGUAUGCCGCGAGGGUACGGGA
AGCGCAAU-AUGCUGUUA--CCAC--U
>Thermus
---AAUCCCCC-GUGCC-CAUAGCGGCG-UGGAACCACCCGUUCCCAUUCCGAACA-CGG
AAGUGAAA-CGCGC-----CAGCGCCGA----UGGUACUGGG-CGGGCGACCGCCUGGGA
GA-GUAGG-UCGGUGCG-GGGGA---U
>Zea
-GGAU-------GCGAUC-AUACCAGCAC-UAAAGCACCGGAUCCCA-UCAGAACU-CCG
AAGUUAAG-CGUGC-----UUGGGC-GAGAG-UAGUACUAGGAUGGGUGACCUCCUGGGA
AG-UCCUC-GUGUUGC----AUUC--C
>Caenorhabditis
--GC--UUA----CGACC-AUAUCACGU-UGAAUGCACGCCAUCCCG-UCCGAUCU-GGC
AAGUUAAG-CAAC-----GUUGAGUCC-AGU-UAGUACUUGGAUCGGAGACGGCCUGGGA
AU-CCUGG-AUGUUGUAA----GC--U
>Homo
--GU--CUA----CGGCC-AUACCACCC-UGAACGCGCCCGAUCUCG-UCUGAUCU-CGG
AAGCUAAG-CAGG-----GUCGGGCCU-GGU-UAGUACUUGGAUGGGAGACCGCCUGGGA
AU-ACCGG-GUGCUGU-AG---GCUUU
>Methanospirillum
-U----CAAUA-GCGGCC-ACAGCAGGU-GUGUCACACCCGUUCCCAUUCCGAACA-CGG
AAGUUAAGA-CACC----U-CACGUGGAUGA-CGGUACUGAGGUACGCGAGUCCUCGGGA
AA-UCAUCCUCGCUGCUA-UUG--U-U
>Pyrobaculum
--GCCCCUAAC-CCGGCC-AUAGGCGCCGGUGAUACGCCCGGUCUCA-UCAGAACC-CGG
AAGCUAAGGCCGGC----GCCGCGC--UCGG-GAGUACUGGGCUCCGCGAGGGCCCGGGA
AA-CCGGCG-UGCUGGGAGGGGGCU-U
>Methanococcus
-UGAC---AUA-ACGGUC-AAAGCGGAG-GUGUAACAUCCGAUCCCAUCCCGAUCU-CGG
AAAUUAAG-CCCUC-----CAGCGAUUCUUU-AAGUACU------GCUAUCUA-GUGGGA
AC-AAAGUGACGCCGUU-AGUCAC---
>Dictyostelium
-GUAU---ACG----GCC-AUACUAGGUU-GGAAACACAUCAUCCC-GUUCGAUCU-GAU
AAGUAAAU-CGACC-----UCAGGCCUU-CC-AAGUACUCUGGUUGGAGACAACAGGGGA
AC-AUAGG-GUGCU----GUAUAC--U
>Thermotoga
-AUCC---CCG-GGUGCCGAUACUGGGGCGGGAAACACCCGGUUCCAUUCCGAACC-CGG
CCGUUAAG-CCGCC-----CUGGGCCGAUGG-UAGUAU---GGGGGCAGCC-CCAUGCGA
GA-GUAGG-UAGCGCCC-GGGGA---U
>Agrobacterium
-CGAC-C---UGGUGGUC-AUCGCGGGG-CGGCUGCACCCGUUCCCUUUCCGAACA-CGG
CCGUGAAA-C---G--CCCCAGCGCCAA----UGGUACUUCGUCUCAAGAC-GC--GGGA
G-AGUAGG-UCGCUGCCA---GGUC-U
>Drosophila
--G-C-C---A-ACGACC-AUACCACGC-UGAAUACAUCGGUUCUCGU-CCGAUCA-CCG
AAAUUAAG-CAGCG--UCGG-GCGCGGU----UAGUACUUAGAUGGGGGACCGCUUGGGA
A-CACCGC-GUGUUGUU----GGCC-U
>Escherichia
-UG-C-C---UGGCGGCC-GUAGCGCGG-UGGUCCCACCUGACCCCAUGCCGAACU-CAG
AAGUGAAA-C---G--CCGUAGCGCCGA----UGGUAGU--GUGGGGUCUCCCCAUGCGA
G-AGUAGG-GAACUGCCA---GGCA-U
>Methanothermobacter
--G-U-U----GGCGGUC-AUGGCGUGG-GGUUUAUACCUGAUCUCGUUUCGAUCU-CAG
UAGUUAAG-UC-----CUGCUGCGUUGUGGGUGUGUACUGCGGUUUUUUGCUGU--GGGA
AGCCCACU-UCACUGCCA---GACA-A
>Sulfolobus
--GCC-C---ACCCGGUC-ACAGUGAGC-GGGCAACACCCGGACUCAUUUCGAACC-CGG
AAGUUAAG-CCGCUCACGUUAGUGGGGCCGU-GGAUACCGUGAGGA---UCCGC-----A
GCCCCACU-AAGCUGGGAUG-GGUUUU
