>Saccharomyces
GG------UUGCGGCCAUAUCUACC-AGA-AAGCACCGUUCUCCGU-CCGAUCAACUGUAGUUAAGCUGGUAAGAGC--CUG-A-CCG-AGUAGUG-------UAGUGGGUGA-CCAU--A----CGCGAAAC-UC---AGGUG---CUGC---AA---UCU
>Candida
GG------UUGCGGCCAUAUCUAGC-AGA-AAGCACCGUUCCCCGU-UCGAUCAACCGUAGUUAAGCUGCUAAGAGC--AAU-A-CCG-AGUAGUG-------UAGUGGGAGA-CCAU--A----CGCGAAAC-UA---UUGUG---CUGC---AA---UCU
>Nosema
GA-------UACGGUUAUAUUUACU-GAA-AACCACCGGAACCCAU-CAGAAC-UCCGAAGUUAAACCAGUAUGAG-C-UU---AAUU-AGUACUA-------AGAAGGGAGA-CCAC--U----UGGGAACG-UU---GGGUG---GU------------A
>Zea
GG------AUGCGAUCAUACCAGCA-CUA-AAGCACCGGAUCCCAU-CAGAAC-UCCGAAGUUAAGCGUGCUUGGG-C-GA---GAGU-AGUACUA-------GGAUGGGUGA-CCUC--C----UGGGAAGU-CC---UCGUG---UUGC---AU---UCC
>Dictyostelium
GU------AUACGGCCAUACUAGGU-UGG-AAACACAUCAUCCCGU-UCGAUC-UGAUAAGUAAAUCGACCUCAGG-C-CU---UCCA-AGUACUC-------UGGUUGGAGA-CAAC--A----GGGGAACA-UA---GGGUG---CUGU---AU---ACU
>Euglena
GA------GUACGGCCAUACUACCG-GGA-AUACACCUGAACCCGU-UCGAUU-UCAGAAGUUAAGCCGGGUUAGG-C-CC--A-GUU-AGUACUG-------A-GUGGGCGA-CCAC--U----UGGGAACA-CU---GGGUG---CUGU---AC--GCUU
>Cryptosporidium
GC------AAUCGGCCAUACUACAU-CGA-AUAUACCGGAUCCCAU-CAGAAC-UCCGAAGUCAAGCGGUGUAAGG-U-UC---GGUU-AGUACUA-------GGGUGGGGGA-CCAC--C----UGGGAAGA-CC--AGAAUG---UCGA---UCG-CCUC
>Caenorhabditis
GC------UUACGACCAUAUCACGU-UGA-AUGCACGCCAUCCCGU-CCGAUC-UGGCAAGUUAAGCAACGUUGAG-U-CC---AGUU-AGUACUU-------GGAUCGGAGA-CGGC--C----UGGGAAUC-CU---GGAUG---UUGU---AA---GCU
>Drosophila
GC------CAACGACCAUACCACGC-UGA-AUACAUCGGUUCUCGU-CCGAUC-ACCGAAAUUAAGCAGCGUCGGG-C-GC---GGUU-AGUACUU-------AGAUGGGGGA-CCGC--U----UGGGAACA-CC---GCGUG---UUGU---UGG--CCU
>Xenopus
GC------CUACGGCCAUACCACCC-UGA-AAGUGCCCGAUAUCGU-CUGAUC-UCGGAAGCCAAGCAGGGUCGGG-C-CU---GGUU-AGUACUU-------GGAUGGGAGA-CCGC--C----UGGGAAUA-CC---AGGUG---UCGU---AGG--CUU
>Cryptobranchus
GC------CUACGGCCAUACCACCC-UGA-AUGCGCCCGAUCUCGU-CUGAAC-UCAGAAGCUAAGCAGGCUUGGG-C-CU---GGUU-AGUACUU-------GGAUGGGAGA-CUGC--C----UGGGAAUA-CC---AGGUG---CUGU---AGG-CUUU
>Homo
GU------CUACGGCCAUACCACCC-UGA-ACGCGCCCGAUCUCGU-CUGAUC-UCGGAAGCUAAGCAGGGUCGGG-C-CU---GGUU-AGUACUU-------GGAUGGGAGA-CCGC--C----UGGGAAUA-CC---GGGUG---CUGU---AGG-CUUU
>Gelidium
AC------AUUCGGCCAUACUAAGU-CGACAUGUACCCGAUCCCAUCCCGAAC-UCGGAAGUCAAGUCGCUUCAGG-C-CG---GGUU-AGUACUG-------AGGUGAGGGA-UCAC--U----CGGGAAUC-CC---CGGUG---CCG------A-AUGU
>Amoebidium
GG------UUACGGCCAUACCUAGC-AGA-AAGCACCCCAUCUCGU-CCGAUC-UGGGAAGUUAAACUGCUAUGGG-C-GU---GGUU-AGUACUG-------CGGUGGGGGA-CCAC--G----CGGGAAUA-CC---ACGUG---CUGU---AA---UCU
>Physarum
GG------AUGCGGCCAUACUAAGG-AGA-AAGCACCUCAUCCCGU-CCGAUC-UGAGAAGUUAAGCUCCUUCAGG-C-GU---GGUU-AGUACUG-------GGGUGGGGGA-CCAC--C----UGGGAAUC-CC---ACGUG---CUGC---AU--UCUU
>Desulfurococcus
UGCCC-G-ACCCGGCCAUAGUGGCC-GGG-CAACACCCGGUCUCGUUUCGAAC-CCGGAAGUUAAGCCGGCCACGU---CA---GAAC-GGCCGUG-------AGGUCCGAGA-GGCC--U----CGCAGCCGU-UCUGAGCUGGGA----UCG-GG-CACC
>Sulfolobus
GCCC----ACCCGGUCACAGUGAGC-GGG-CAACACCCGGACUCAUUUCGAAC-CCGGAAGUUAAGCCGCUCA-CGUUA--G-U-G--GGGCCGUG-------GAUACCGUGA-GGAUCCGCAGC---CCCAC-UA---AGCUG---GGAU---GGG-UUUU
>Methanothermobacter
GU------UGGCGGUCAUGGCGUGG-GGU-UUAUACCUGAUCUCGUUUCGAUC-UCAGUAGUUAAGUCCUGCUGCGUUG--UGG-GUG-UGUACUG-------CGGUUUUU---UGCU--G----UGGGAAGC-CC--ACUUCA---CUGC---CAG-ACAA
>Campylobacter
AUGU----CCGUGAUUAUACAGAUG-UGG-AAACGCCUUGCUCCAUCCCGAAC-CAAGAAGCUAAGCACAUCGUGGG--U-----GAU-GAUACUA-------CGCCUUAC---UGGC--A--G-GGGGAAAG-UA---GCUCA---UUGC---GG--ACUU
>Thermoplasma
GG------CAACGGUCAUAGCAGCA-GGG-AAACACCAGAUCCCAUUCCGAAC-UCGACGGUUAAGCCUGCU-GCGUAU--U-G-CGU-UGUACUG-------UAUGCCGCGA-GGGU--A----CGGGAAGC-GC--AAUAUG---CUGU---UAC-CACU
>Pyrobaculum
GCCCC-UAACCCGGCCAUAGGCGCCGGUG-AUACGCCCGGUCUCAU-CAGAAC-CCGGAAGCUAAGGCCGGCGCCGCGC--U-C-GGG-AGUACUG-------GGCUCCGCGA-GGGC--C----CGGGAAAC-CG---GCGUG---CUGGGAGGGG-GCUU
>Nanoarchaeum
GUUUCGUGGGAGGGCCAUAGCGGCCCGGG-AACCACCCGUACCCAUCUCGAAC-ACGGAAGUUAAGCCGGGCCGCGUCC--C-G-AGU-GGUACUG-------CCC--CGCGA-AGGG--G----UGGGAAGC-UC--GGGAUG---------------CCC
>Methanococcus
UGACA---UAACGGUCAAAGCGGAG-GUG-UAACAUCCGAUCCCAUCCCGAUC-UCGGAAAUUAAGCCCUCCAGCGAUU--C-U-UUA-AGUACUG-------CU-------A-UCUA--G----UGGGAACA-AA--GUGACG---CCGU---UAG-UCAC
>Methanothermococcus
UGAUA---UAACGGUCAUAGCGGAG-GAG-CCACAUCCGAUCCCGUCCCGAUC-UCGGAAAUUAAGCCCUCCAGCGAUA--C-C-CUA-AGUACUG-------CCAUUUG----------G----UGGGAACA-GG--GUGACG---CUGU---UGA-UCAC
>Archeoglobus
AUGC----CGACGGUCAUAGGACGG-GGG-AAACACCCGGACUCAUUCCGAAC-CCGGAAGUUAAGCCCCGUUCCGUCC--C-G-CAC-AGUACUG-------UGUUCCGAGA-GGGC--A----CGGGAACU-GC---GGGAA---CCGU---CGG--CUU
>Methanothermus
GGUA----CGGCGACCAUAGCGGGG-GGG-CCACACCUGAACCCGUUCCGAUC-UCAGAAGUUAAGCCCCCCUGCGUUG--G-A-GGU-GGUACUG-------CAACGUU--AGU--U--G----CGGGAAGC-CU--CCAACG---UCGC---CGG-CCCA
>Pyrococcus
GGUA----CGGCGGUCAUAGCGGGG-GGG-CCACACCCGGUCUCAUUUCGAAC-CCGGAAGUUAAGCCCCCCAGCGAUC--C-C-GGC-UGUACUG-------CCCUCCGAGA-GGGG--G----CGGGAACC-GG---GGACG---CCGC---CGG--CCA
>Thermococcus
GGUA----CGGCGGUCAUAGCGGCG-GGG-UCACACCCGGUCUCGUUUCGACC-CCGGAAGUUAAGCCCGCCAGCGAUC--C-C-GGU-UGUACUG-------CCCUCCGGGA-GGGG--G----CGGGAACC-GG---GGACG---CCGC---CGG-CCAC
>Methanospirillum
UCAA----UAGCGGCCACAGCAGGU-GUG-UCACACCCGUUCCCAUUCCGAAC-ACGGAAGUUAAGACACCUCACGUGG--A-U-GAC-GGUACUG-------AGGUACGCGA-GUCC--U----CGGGAAAU-CA--UCCUCG---CUGC---UAU-UGUU
>Halorubrum
GU------AGGCGGCCAAAGCGGCA-GGG-AAAGACCCGUACCCAUUCCGAAC-ACGGAAGUGAAGCCUGCCAGCGUAC--C-A-GCU-AGUACUG-------GAGUGGGAGA-CCCU--C----UGGGAGCG-CU--GGUUCG---CCGC---CUA--CUC
>Natrinema
UUA-----CGGCGGCCACAGCGGCG-AGG-UACCUCCCGUACCCAUCCCGAAC-ACGGAAGAUAAGCUCGCCUGCGUUU--C-G-GUC-AGUACUG-------GAGUGGGCGA-CCCU--C----UGGGAACC-CC--GAUUCG---CCGC---CACCACUC
>Haloferax
UU-----AAGGCGGCCAGAGCGGUG-AGG-UUCCACCCGUACCCAUCCCGAAC-ACGGAAGUUAAGCUCACCUGCGUUC--U-G-GUC-AGUACUG-------GAGUGAGCGA-UCCU--C----UGGGAAAU-CC--AGUUCG---CCGC-------CCCU
>Halobacterium
UUA-----AGGCGGCCAUAGCGGUG-GGG-UUACUCCCGUACCCAUCCCGAAC-ACGGAAGAUAAGCCCGCCUGCGUUC--C-G-GUC-AGUACUG-------GAGUGCGA---GCCU--C----UGGGAAAU-CC--GGUUCG---CCGC---CU---ACU
>Haloarcula
UU------AGGCGGCCACAGCGGUG-GGGUUGCCUCCCGUACCCAUCCCGAAC-ACGGAAGAUAAGCCCACCAGCGUUC--C-G-GGG-AGUACUG-------GAGUGCGCGA-GCCU--C----UGGGAAAC-GC--GGUUCG---CCGC---C----ACC
>Methanolobus
GG------UGGCGGCCAUAGCGGCG-GGG-CAAUUCCUGUACCCAUCCCGAAC-ACAGAAGAUAAGCCCGCCUGCGUUC--U-A-UAC-UGUACUA-------AAGUAUGAGA-GUCU--U----UGGGAAAU-AU--GGAACG---CUGC---CAC-CAAC
>Methanosarcina
GGAGU---UUGGCGCCAUAGCGGCA-GUG-UAACUCCUGUACCCAUCCCGAAC-ACAGUAGAUAAGCCUGCCCGCGUUC--C-U-UAC-UGUACUG-------AAGUGUGCGA-GCCU--U----CGGGAACU-CU--GGAUCG---CUGCCAUACU-CACC
>Methanosarcinav
GAUC----UGGCAGCCAUAGCGGCA-GGU-GUAAUCCUGUACCCAUCCCGAAC-ACAGUAGAUAAGCCUGCCCGCGUUC--C-UUGCC-UGUACUG-------AAGUGUGCGA-GC-U--U----CGGGAACU-CU--GGAUCG----UGCCAUA-U-CAGU
>Streptomyces
GUUU----CGGUGGUCAUAGCGUUA-GGG-AAACGCCCGGUUACAUUCCGAAC-CCGGAAGCUAAGCCUUACAGCGC--C-----GAU-GGUACUG-------CAG-GGGGGA-CCCU--G----UGGGAGAG-UA---GGACG---CCGC---CGA--ACA
>Escherichia
UGCC----UGGCGGCCGUAGCGCGG-UGG-UCCCACCUGACCCCAUGCCGAAC-UCAGAAGUGAAACGCCGUAGCGC--C-----GAU-GGUAGUG-------UGGGGU--CU-CCCC--A----UGCGAGAG-UA---GGGAA---CUGC---CAG-GCAU
>Flavobacterium
UA------AGGUGGUUAUUGCGGCG-GGG-CUCGACCUCUUCCCAUCCCGAAC-AGAGUAGUUAAGCCCGCCUGCG-----C-A-GAU-GGUACUG-------CA-------G-UUAU--G----UGGGAGAG-UA---UGUCG---UCGC---C---UUUC
>Chlamydia
CU------UGGUGAUAAUAGAGAGA-GGG-AAACACCUGACACCAUUCCGAAC-UCAGAAGUUAAGCCUCUGAUCGC--U-----GAU-GGUACUA-------UAC---ACAA-GAGU--A----UGGGAGAG-UA---GGUCG---UCGC---CAA-GCAU
>Aquifex
CCCC----UGGUGGCCAUAGCGGGG-GGG-AAACACCCGGUCCCAUUCCGAAC-CCGGCAGUUAAGCCCCCCAGCGC--C-----GAU-GAUACUG-------UGCCGG-CAG-CGGC--A----CGGGAAAG-UA---GGUCG---CUGC---CAG--GGG
>Thermotoga
AUCCC-C-GGGUGCCGAUACUGGGGCGGG-AAACACCCGGUUCCAUUCCGAAC-CCGGCCGUUAAGCCGCCCUGGGC--C-----GAU-GGUAGUA-------UGGGGG-CAG-CCCC--A----UGCGAGAG-UA---GGUAG---CGCC---CGG-GGAU
>Agrobacterium
CGACC---UGGUGGUCAUCGCGGGG-CGG-CUGCACCCGUUCCCUUUCCGAAC-ACGGCCGUGAAACGCCCCAGCGC--C-----AAU-GGUACUU-------CGUCUCAAGA-C-----G----CGGGAGAG-UA---GGUCG---CUGC---CAG-GUCU
>Thermus
AAUCC-C-CCGUGCCCAUAGCGGCG-UGG-AACCACCCGUUCCCAUUCCGAAC-ACGGAAGUGAAACGCGCCAGCGC--C-----GAU-GGUACUG-------GGC-GGGCGA-CCGC--C----UGGGAGAG-UA---GGUCG---GUGC---GGG-GGAU
>Geobacillus
CC------UAGUGGUGAUAGCGGAG-GGG-AAACACCCGUUCCCAUCCCGAAC-ACGGAAGUUAAGCCCUCCAGCGC--C-----GAU-GGUAGUU-------GGGGCC-AGC-GCCC--C----UGCAAGAG-UA---GGUCG---CUGC---UA---GGC
>Bacillus
UU------UGGUGAUGAUGGCAGAG-AGG-UCACACCCGUUCCCAUACCGAAC-ACGGAAGUUAAGCUCUCUAGCGC--C-----GAU-GGUAGUU-------GGGACCUUGU-CC----C----UGUGAGAG-UA---GGACG---UCGC---CA---AGC
>Spirochaeta
CC------UGGUGAUCAUAGCGAAG-AGG-UCCCACCCGUUCCCAUCCCGAAC-ACGGAAGUUAAGCUCUUCAGCGC--C-----GAU-GGUACUGCUAUUGC-----------------------GGGAGAG-UA---GGUCG---UCGC---CAG--GCU

