>Saccharomyces
GGU------U------GCGGCCAUAU-CUACC-AG-AAAG-CACCGUUCUCCGU-CCGAU
CAACUGUAGUUAAGCUGGUAAGAGC-CUGACCGAGUAGUGUAGUGGGUGACCAUACGCGA
AAC-UC-AGGUGCUGC----A--------AUCU
>Candida albicans 1
GGU------U------GCGGCCAUAU-CUAGC-AG-AAAG-CACCGUUCCCCGU-UCGAU
CAACCGUAGUUAAGCUGCUAAGAGC-AAUACCGAGUAGUGUAGUGGGAGACCAUACGCGA
AAC-UA-UUGUGCUGC----A--------AUCU
>Nosema bombycis 1
GA-------U------ACGGUUAUAU-UUACU-GA-AAAC-CACCGGAACCCAU-CAGAA
CU-CCGAAGUUAAACCAGUAUGAGC-UU-AAUUAGUACUAAGAAGGGAGACCACUUGGGA
ACG-UU-GGGU------------------GGUA
>Zea mays 1
GGA------U------GCGAUCAUAC-CAGCA-CU-AAAG-CACCGGAUCCCAU-CAGAA
CU-CCGAAGUUAAGCGUGCUUGGGC-GA-GAGUAGUACUAGGAUGGGUGACCUCCUGGGA
AGU-CC-UCGUGUUGC----A--------UUCC
>Dictyostelium discoideum 1
GUA------U------ACGGCCAUAC-UAGGU-UG-GAAA-CACAUCAUCCCGU-UCGAU
CU-GAUAAGUAAAUCGACCUCAGGC-CU-UCCAAGUACUCUGGUUGGAGACAACAGGGGA
ACA-UA-GGGUGCUGU----A--------UACU
>Euglena
GAG------U------ACGGCCAUAC-UACCG-GG-AAUA-CACCUGAACCCGU-UCGAU
UU-CAGAAGUUAAGCCGGGUUAGGC-CC-AGUUAGUACUGA-GUGGGCGACCACUUGGGA
ACA-CU-GGGUGCUGU----AC-------GCUU
>Cryptosporidium parvum 1
GCA------A------UCGGCCAUAC-UACAU-CG-AAUA-UACCGGAUCCCAU-CAGAA
CU-CCGAAGUCAAGCGGUGUAAGGU-UC-GGUUAGUACUAGGGUGGGGGACCACCUGGGA
AGA-CCAGAAUGUCGA----UC---G---CCUC
>Caenorhabditis elegans 1
GCU------U------ACGACCAUAU-CACGU-UG-AAUG-CACGCCAUCCCGU-CCGAU
CU-GGCAAGUUAAGCAACGUUGAGU-CC-AGUUAGUACUUGGAUCGGAGACGGCCUGGGA
AUC-CU-GGAUGUUGU----AA--------GCU
>Drosophila melanogaster 1
GCC------A------ACGACCAUAC-CACGC-UG-AAUA-CAUCGGUUCUCGU-CCGAU
CA-CCGAAAUUAAGCAGCGUCGGGC-GC-GGUUAGUACUUAGAUGGGGGACCGCUUGGGA
ACA-CC-GCGUGUUGU----UG-------GCCU
>Xenopus laevis 1
GCC------U------ACGGCCAUAC-CACCC-UG-AAAG-UGCCCGAUAUCGU-CUGAU
CU-CGGAAGCCAAGCAGGGUCGGGC-CU-GGUUAGUACUUGGAUGGGAGACCGCCUGGGA
AUA-CC-AGGUGUCGU----AG-------GCUU
>Cryptobranchus alleganiensis 1
GCC------U------ACGGCCAUAC-CACCC-UG-AAUG-CGCCCGAUCUCGU-CUGAA
CU-CAGAAGCUAAGCAGGCUUGGGC-CU-GGUUAGUACUUGGAUGGGAGACUGCCUGGGA
AUA-CC-AGGUGCUGU----AG---G---CUUU
>Homo
GUC------U------ACGGCCAUAC-CACCC-UG-AACG-CGCCCGAUCUCGU-CUGAU
CU-CGGAAGCUAAGCAGGGUCGGGC-CU-GGUUAGUACUUGGAUGGGAGACCGCCUGGGA
AUA-CC-GGGUGCUGU----AG---G---CUUU
>Gelidium amansii 1
ACA------U------UCGGCCAUAC-UAAGU-CGACAUG-UACCCGAUCCCAUCCCGAA
CU-CGGAAGUCAAGUCGCUUCAGGC-CG-GGUUAGUACUGAGGUGAGGGAUCACUCGGGA
AUC-CC-CGGUGCCGA-------------AUGU
>Amoebidium parasiticum 1
GGU------U------ACGGCCAUAC-CUAGC-AG-AAAG-CACCCCAUCUCGU-CCGAU
CU-GGGAAGUUAAACUGCUAUGGGC-GU-GGUUAGUACUGCGGUGGGGGACCACGCGGGA
AUA-CC-ACGUGCUGU----AA--------UCU
>Physarum polycephalum 1
GGA------U------GCGGCCAUAC-UAAGG-AG-AAAG-CACCUCAUCCCGU-CCGAU
CU-GAGAAGUUAAGCUCCUUCAGGC-GU-GGUUAGUACUGGGGUGGGGGACCACCUGGGA
AUC-CC-ACGUGCUGC----AU-------UCUU
>Desulfurococcus mobilis 1
UGC-CC-GAC------CCGGCCAUAG-UGGCC-GG-GCAA-CACCCGGUCUCGUUUCGAA
CC-CGGAAGUUAAGCCGGCC-ACGUC-A-GAACGGCCGUGAGGUCCGAGAGGCCUCGC-A
GCCGUU-CUGAGCUGGGAUCGG---G---CACC
>Sulfolobus
GCC-C---AC------CCGGUCACAG-UGAGC-GG-GCAA-CACCCGGACUCAUUUCGAA
CC-CGGAAGUUAAGCCGCUC-ACGUU-A-GUGGGGCCGUGGAUACCGUGAGGAUCCGC-A
GCCCCA-CUAAGCUGGGA-UGG---G---UUUU
>Methanothermobacter
GU------UG------GCGGUCAUGG-CGUGG-GG-UUUA-UACCUGAUCUCGUUUCGAU
CU-CAGUAGUUAAGUCCUGCUGCGUUGUGGGUGUGUACUGCGGUUUUUUG-C-UGUGGGA
AGC-CCACUUCACUGC----CA---G---ACAA
>Campylobacter jejuni 3
AUG-U---CC------GUGAUUAUAC-AGAUG-UG-GAAA-CGCCUUGCUCCAUCCCGAA
CC-AAGAAGCUAAGCACAUCGUGGG----UGAUGAUACUACGCCU-UACUGGCAGGGGGA
AAG-UA-GCUCAUUGC----GG-------ACUU
>Thermoplasma
GGC------A------ACGGUCAUAG-CAGCA-GG-GAAA-CACCAGAUCCCAUUCCGAA
CU-CGACGGUUAAGCCUGC-UGCGUAUU-GCGUUGUACUGUAUGCCGCGAGGGUACGGGA
AGC-GCAAUAUGCUGU----UA---C---CACU
>Pyrobaculum aerophilum 1
GCC-CCUAAC------CCGGCCAUAGGCGCCG-GU-GAUA-CGCCCGGUCUCAU-CAGAA
CC-CGGAAGCUAAGGCCGGCGCCGCGCU-CGGGAGUACUGGGCUCCGCGAGGGCCCGGGA
AAC-CG-GCGUGCUGG----GAGGGG---GCUU
>Nanoarchaeum equitans 1
GUU------UCGUGGGAGGGCCAUAG-CGGCCCGG-GAAC-CACCCGUACCCAUCUCGAA
CA-CGGAAGUUAAGCCGGGCCGCGUCCC-GAGUGGUACUGCCC--CGCGAAGGGGUGGGA
AGC-UCGG---GAUG---------------CCC
>Methanococcus
UGACA---UA------ACGGUCAAAG-CGGAG-GU-GUAA-CAUCCGAUCCCAUCCCGAU
CU-CGGAAAUUAAGCCCUCCAGCGAUUC-UUUAAGUACUGCUAUC-------UAGUGGGA
ACA-AAGUGACGCCGU----UA---G---UCAC
>Methanothermococcus
UGAUA---UA------ACGGUCAUAG-CGGAG-GA-GCCA-CAUCCGAUCCCGUCCCGAU
CU-CGGAAAUUAAGCCCUCCAGCGAUAC-CCUAAGUACUGCCAUU-------UGGUGGGA
ACA-GGGUGACGCUGU----UG---A---UCAC
>Archeoglobus
AUG-C---CG------ACGGUCAUAG-GACGG-GG-GAAA-CACCCGGACUCAUUCCGAA
CC-CGGAAGUUAAGCCCCGUUCCGUCCC-GCACAGUACUGUGUUCCGAGAGGGCACGGGA
ACU-GC-GGGAACCGU----CG---G----CUU
>Methanothermus
GGU-A---CG------GCGACCAUAG-CGGGG-GG-GCCA-CACCUGAACCCGUUCCGAU
CU-CAGAAGUUAAGCCCCCCUGCGUUGG-AGGUGGUACUGCAACG--UUAGU-UGCGGGA
AGC-CUCCAACGUCGC----CG---G---CCCA
>Pyrococcus
GGU-A---CG------GCGGUCAUAG-CGGGG-GG-GCCA-CACCCGGUCUCAUUUCGAA
CC-CGGAAGUUAAGCCCCCCAGCGAUCC-CGGCUGUACUGCCCUCCGAGAGGGGGCGGGA
ACC-GG-GGACGCCGC----CG---G----CCA
>Thermococcus
GGU-A---CG------GCGGUCAUAG-CGGCG-GG-GUCA-CACCCGGUCUCGUUUCGAC
CC-CGGAAGUUAAGCCCGCCAGCGAUCC-CGGUUGUACUGCCCUCCGGGAGGGGGCGGGA
ACC-GG-GGACGCCGC----CG---G---CCAC
>Methanospirillum hungatei 1
UCA-A---UA------GCGGCCACAG-CAGGU-GU-GUCA-CACCCGUUCCCAUUCCGAA
CA-CGGAAGUUAAGACACCUCACGUGGA-UGACGGUACUGAGGUACGCGAGUCCUCGGGA
AAU-CAUCCUCGCUGC----UA---U---UGUU
>Halorubrum distributum 1
GUA------G------GCGGCCAAAG-CGGCA-GG-GAAA-GACCCGUACCCAUUCCGAA
CA-CGGAAGUGAAGCCUGCCAGCGUACC-AGCUAGUACUGGAGUGGGAGACCCUCUGGGA
GCG-CUGGUUCGCCGC----CU---A----CUC
>Natrinema sp. 1
UUA-----CG------GCGGCCACAG-CGGCG-AG-GUAC-CUCCCGUACCCAUCCCGAA
CA-CGGAAGAUAAGCUCGCCUGCGUUUC-GGUCAGUACUGGAGUGGGCGACCCUCUGGGA
ACC-CCGAUUCGCCGC----CA---C--CACUC
>Haloferax
UUA-----AG------GCGGCCAGAG-CGGUG-AG-GUUC-CACCCGUACCCAUCCCGAA
CA-CGGAAGUUAAGCUCACCUGCGUUCU-GGUCAGUACUGGAGUGAGCGAUCCUCUGGGA
AAU-CCAGUUCGCCGC-------------CCCU
>Halobacterium
UUA-----AG------GCGGCCAUAG-CGGUG-GG-GUUA-CUCCCGUACCCAUCCCGAA
CA-CGGAAGAUAAGCCCGCCUGCGUUCC-GGUCAGUACUGGAGUGC--GAGCCUCUGGGA
AAU-CCGGUUCGCCGC----C--------UACU
>Haloarcula
UUA------G------GCGGCCACAG-CGGUG-GG-GUUGCCUCCCGUACCCAUCCCGAA
CA-CGGAAGAUAAGCCCACCAGCGUUCC-GGGGAGUACUGGAGUGCGCGAGCCUCUGGGA
AAC-GCGGUUCGCCGC-------------CACC
>Methanolobus tindarius 1
GGU------G------GCGGCCAUAG-CGGCG-GG-GCAA-UUCCUGUACCCAUCCCGAA
CA-CAGAAGAUAAGCCCGCCUGCGUUCU-AUACUGUACUAAAGUAUGAGAGUCUUUGGGA
AAU-AUGGAACGCUGC----CA---C---CAAC
>Methanosarcina
GGAGU---UU------GGCGCCAUAG-CGGCA-GU-GUAA-CUCCUGUACCCAUCCCGAA
CA-CAGUAGAUAAGCCUGCCCGCGUUCC-UUACUGUACUGAAGUGUGCGAGCCUUCGGGA
ACU-CUGGAUCGCUGC----CA---UACUCACC
>Methanosarcina.v
GAU-C---UG------GCAGCCAUAG-CGGCA-GG-UGUA-AUCCUGUACCCAUCCCGAA
CA-CAGUAGAUAAGCCUGCCCGCGUUCCUUGCCUGUACUGAAGUGUGCGAGC-UUCGGGA
ACU-CUGGAUCG-UGC----CAU-AU---CAGU
>Streptomyces ambofaciens 1
GUU-U---CG------GUGGUCAUAG-CGUUA-GG-GAAA-CGCCCGGUUACAUUCCGAA
CC-CGGAAGCUAAGCCUUACAGCGC----CGAUGGUACUGCAGGG-GGGACCCUGUGGGA
GAG-UA-GGACGCCGC----CG-------AACA
>Escherichia
UGC-C---UG------GCGGCCGUAG-CGCGG-UG-GUCC-CACCUGACCCCAUGCCGAA
CU-CAGAAGUGAAACGCCGUAGCGC----CGAUGGUAGUGUGGGG-U-CUCCCCAUGCGA
GAG-UA-GGGAACUGC----CA---G---GCAU
>Flavobacterium hydatis 1
UA------AG------GUGGUUAUUG-CGGCG-GG-GCUC-GACCUCUUCCCAUCCCGAA
CA-GAGUAGUUAAGCCCGCCUGCGC----AGAUGGUACUGCAG-------UUAUGUGGGA
GAG-UA-UGUCGUCGC----C--------UUUC
>Chlamydia trachomatis 1
CU------UG------GUGAUAAUAG-AGAGA-GG-GAAA-CACCUGACACCAUUCCGAA
CU-CAGAAGUUAAGCCUCUGAUCGC----UGAUGGUACUAUAC-A-C-AAGAGUAUGGGA
GAG-UA-GGUCGUCGC----CA---A---GCAU
>Aquifex aeolicus 1
CCC-C---UG------GUGGCCAUAG-CGGGG-GG-GAAA-CACCCGGUCCCAUUCCGAA
CC-CGGCAGUUAAGCCCCCCAGCGC----CGAUGAUACUGUGCCG-GCAGCGGCACGGGA
AAG-UA-GGUCGCUGC----CA-------GGGG
>Thermotoga maritima 1
AUC-CC-CGG------GUGCCGAUAC-UGGGGCGG-GAAA-CACCCGGUUCCAUUCCGAA
CC-CGGCCGUUAAGCCGCCCUGGGC----CGAUGGUAGUAUGGGG-GCAGCCCCAUGCGA
GAG-UA-GGUAGCGCC----CG---G---GGAU
>Agrobacterium tumefaciens 6
CGA-CC--UG------GUGGUCAUCG-CGGGG-CG-GCUG-CACCCGUUCCCUUUCCGAA
CA-CGGCCGUGAAACGCCCCAGCGC----CAAUGGUACUUCGU-C-UCAAGAC-GCGGGA
GAG-UA-GGUCGCUGC----CA---G---GUCU
>Thermus
AAU-CC-CCC------GUGCCCAUAG-CGGCG-UG-GAAC-CACCCGUUCCCAUUCCGAA
CA-CGGAAGUGAAACGCGCCAGCGC----CGAUGGUACUGGGCGG-GCGACCGCCUGGGA
GAG-UA-GGUCGGUGC----GG---G---GGAU
>Geobacillus stearothermophilus 1
CC------UA------GUGGUGAUAG-CGGAG-GG-GAAA-CACCCGUUCCCAUCCCGAA
CA-CGGAAGUUAAGCCCUCCAGCGC----CGAUGGUAGUUGGGGC-CAGCGCCCCUGCAA
GAG-UA-GGUCGCUGC----UA--------GGC
>Bacillus anthracis 1
UU------UG------GUGAUGAUGG-CAGAG-AG-GUCA-CACCCGUUCCCAUACCGAA
CA-CGGAAGUUAAGCUCUCUAGCGC----CGAUGGUAGUUGGG-A-CCUUGUCCCUGUGA
GAG-UA-GGACGUCGC----CA--------AGC
>Spirochaeta aurantia 1
CC------UG------GUGAUCAUAG-CGAAG-AG-GUCC-CACCCGUUCCCAUCCCGAA
CA-CGGAAGUUAAGCUCUUCAGCGC----CGAUGGUACUGCUA-------UU--GCGGGA
GAG-UA-GGUCGUCGC----CA-------GGCU
