>Saccharomyces
----GGUUG--CGGCCAUAUCUACC-AGAAAGCACCGUUCUCCGUCCGAUCAACUGUAGU
UAAGCUGGUAAGAGCCUGACC-GAGUAGUGUAGUGGGUGACCAUACGCGAAACUCAG-GU
GCUGCAAUCU-----
>Candida albicans 1
----GGUUG--CGGCCAUAUCUAGC-AGAAAGCACCGUUCCCCGUUCGAUCAACCGUAGU
UAAGCUGCUAAGAGCAAUACC-GAGUAGUGUAGUGGGAGACCAUACGCGAAACUAUU-GU
GCUGCAAUCU-----
>Nosema bombycis 1
-------GAUACGGUUAUAUUUACU-GAAAACCACCGGAACCCAU-CAGAACUCCGAAGU
UAAACCAGUAUGAGCUUAAU--UAGUACUAAGAAGGGAGACCACUUGGGAACGUUGG-GU
GGUA-----------
>Zea mays 1
----GGAUG--CGAUCAUACCAGCA-CUAAAGCACCGGAUCCCAU-CAGAACUCCGAAGU
UAAGCGUGCUUGGGCGAGAG--UAGUACUAGGAUGGGUGACCUCCUGGGAAGUCCUC-GU
GUUGCAUUCC-----
>Dictyostelium discoideum 1
----GUAUA--CGGCCAUACUAGGU-UGGAAACACAUCAUCCCGU-UCGAUCUGAUAAGU
AAAUCGACCUCAGGCCUUCC--AAGUACUCUGGUUGGAGACAACAGGGGAACAUAGG-GU
GCUGUAUACU-----
>Euglena
----GAGUA--CGGCCAUACUACCG-GGAAUACACCUGAACCCGU-UCGAUUUCAGAAGU
UAAGCCGGGUUAGGCCCAGU--UAGUACUG-AGUGGGCGACCACUUGGGAACACUGG-GU
GCUGUACGCUU----
>Cryptosporidium parvum 1
----GCAAU--CGGCCAUACUACAU-CGAAUAUACCGGAUCCCAU-CAGAACUCCGAAGU
CAAGCGGUGUAAGGUUCGGU--UAGUACUAGGGUGGGGGACCACCUGGGAAGACCAGAAU
GUCGAUCGCCUC---
>Caenorhabditis elegans 1
----GCUUA--CGACCAUAUCACGU-UGAAUGCACGCCAUCCCGU-CCGAUCUGGCAAGU
UAAGCAACGUUGAGUCCAGU--UAGUACUUGGAUCGGAGACGGCCUGGGAAUCCUGG-AU
GUUGUAAGCU-----
>Drosophila melanogaster 1
----GCCAA--CGACCAUACCACGC-UGAAUACAUCGGUUCUCGU-CCGAUCACCGAAAU
UAAGCAGCGUCGGGCGCGGU--UAGUACUUAGAUGGGGGACCGCUUGGGAACACCGC-GU
GUUGUUGGCCU----
>Xenopus laevis 1
----GCCUA--CGGCCAUACCACCC-UGAAAGUGCCCGAUAUCGU-CUGAUCUCGGAAGC
CAAGCAGGGUCGGGCCUGGU--UAGUACUUGGAUGGGAGACCGCCUGGGAAUACCAG-GU
GUCGUAGGCUU----
>Cryptobranchus alleganiensis 1
----GCCUA--CGGCCAUACCACCC-UGAAUGCGCCCGAUCUCGU-CUGAACUCAGAAGC
UAAGCAGGCUUGGGCCUGGU--UAGUACUUGGAUGGGAGACUGCCUGGGAAUACCAG-GU
GCUGUAGGCUUU---
>Homo
----GUCUA--CGGCCAUACCACCC-UGAACGCGCCCGAUCUCGU-CUGAUCUCGGAAGC
UAAGCAGGGUCGGGCCUGGU--UAGUACUUGGAUGGGAGACCGCCUGGGAAUACCGG-GU
GCUGUAGGCUUU---
>Gelidium amansii 1
----ACAUU--CGGCCAUACUAAGUCGACAUGUACCCGAUCCCAUCCCGAACUCGGAAGU
CAAGUCGCUUCAGGCCGGGU--UAGUACUGAGGUGAGGGAUCACUCGGGAAUCCCCG-GU
GCCG-AAUGU-----
>Amoebidium parasiticum 1
----GGUUA--CGGCCAUACCUAGC-AGAAAGCACCCCAUCUCGU-CCGAUCUGGGAAGU
UAAACUGCUAUGGGCGUGGU--UAGUACUGCGGUGGGGGACCACGCGGGAAUACCAC-GU
GCUGUAAUCU-----
>Physarum polycephalum 1
----GGAUG--CGGCCAUACUAAGG-AGAAAGCACCUCAUCCCGU-CCGAUCUGAGAAGU
UAAGCUCCUUCAGGCGUGGU--UAGUACUGGGGUGGGGGACCACCUGGGAAUCCCAC-GU
GCUGCAUUCUU----
>Desulfurococcus mobilis 1
--UGCCCGACCCGGCCAUAGUGGCC-GGGCAACACCCGGUCUCGUUUCGAACCCGGAAGU
UAAGCCGGCCACGUCAGAA---CGGCCGUGAGGUCCGAGAGGCCUCGCAGCCGUUCUGAG
CUGGGAUCGGGCACC
>Sulfolobus
----GCCCACCCGGUCACAGUGAGC-GGGCAACACCCGGACUCAUUUCGAACCCGGAAGU
UAAGCCGCUCACGUUAGUG---GGGCCGUGGAUACCGUGAGGAUCCGC-AGCCCCACUAA
GCUGGGAUGGGUUUU
>Methanothermobacter
----GUUGG--CGGUCAUGGCGUGG-GGUUUAUACCUGAUCUCGUUUCGAUCUCAGUAGU
UAAGUCCUGCUGCGUUGUGGGUGUGUACUGCGGUUUUUUGC--UGUGGGAAGCCCACUUC
ACUGCCAGACAA---
>Campylobacter jejuni 3
--AUGUCCG--UGAUUAUACAGAUG-UGGAAACGCCUUGCUCCAUCCCGAACCAAGAAGC
UAAGCACAUCGUGGGUGA----UGAUACUACGCCUUAC--UGGCAGGGGGAAAGUAGCUC
AUUGCGGACUU----
>Thermoplasma
----GGCAA--CGGUCAUAGCAGCA-GGGAAACACCAGAUCCCAUUCCGAACUCGACGGU
UAAGCCUGCU-GCGUAUUGCG-UUGUACUGUAUGCCGCGAGGGUACGGGAAGCGCAAUAU
GCUGUUACCACU---
>Pyrobaculum aerophilum 1
-GCCCCUAACCCGGCCAUAGGCGCCGGUGAUACGCCCGGUCUCAU-CAGAACCCGGAAGC
UAAGGCCGGCGCCGCGCUCGG-GAGUACUGGGCUCCGCGAGGGCCCGGGAAACCGGC-GU
GCUGGGAGGGGGCUU
>Nanoarchaeum equitans 1
GUUUCGUGGGAGGGCCAUAGCGGCCCGGGAACCACCCGUACCCAUCUCGAACACGGAAGU
UAAGCCGGGCCGCGUCCCGAG-UGGUACUGC--CCCGCGAAGGGGUGGGAAGCUCGGGAU
GCCC-----------
>Methanococcus
-UGACAUAA--CGGUCAAAGCGGAG-GUGUAACAUCCGAUCCCAUCCCGAUCUCGGAAAU
UAAGCCCUCCAGCGAUUCUUU-AAGUACU-------GCUAUCUAGUGGGAACAAAGUGAC
GCCGUUAGUCAC---
>Methanothermococcus
-UGAUAUAA--CGGUCAUAGCGGAG-GAGCCACAUCCGAUCCCGUCCCGAUCUCGGAAAU
UAAGCCCUCCAGCGAUACCCU-AAGUACUGCCAUUUG-------GUGGGAACAGGGUGAC
GCUGUUGAUCAC---
>Archeoglobus
--AUGCCGA--CGGUCAUAGGACGG-GGGAAACACCCGGACUCAUUCCGAACCCGGAAGU
UAAGCCCCGUUCCGUCCCGCA-CAGUACUGUGUUCCGAGAGGGCACGGGAACUGCGG-GA
ACCGUCGGCUU----
>Methanothermus
--GGUACGG--CGACCAUAGCGGGG-GGGCCACACCUGAACCCGUUCCGAUCUCAGAAGU
UAAGCCCCCCUGCGUUGGAGG-UGGUACUGCAACGUUAG---UUGCGGGAAGCCUCCAAC
GUCGCCGGCCCA---
>Pyrococcus
--GGUACGG--CGGUCAUAGCGGGG-GGGCCACACCCGGUCUCAUUUCGAACCCGGAAGU
UAAGCCCCCCAGCGAUCCCGG-CUGUACUGCCCUCCGAGAGGGGGCGGGAACCGGGG-AC
GCCGCCGGCCA----
>Thermococcus
--GGUACGG--CGGUCAUAGCGGCG-GGGUCACACCCGGUCUCGUUUCGACCCCGGAAGU
UAAGCCCGCCAGCGAUCCCGG-UUGUACUGCCCUCCGGGAGGGGGCGGGAACCGGGG-AC
GCCGCCGGCCAC---
>Methanospirillum hungatei 1
--UCAAUAG--CGGCCACAGCAGGU-GUGUCACACCCGUUCCCAUUCCGAACACGGAAGU
UAAGACACCUCACGUGGAUGA-CGGUACUGAGGUACGCGAGUCCUCGGGAAAUCAUCCUC
GCUGCUAUUGUU---
>Halorubrum distributum 1
----GUAGG--CGGCCAAAGCGGCA-GGGAAAGACCCGUACCCAUUCCGAACACGGAAGU
GAAGCCUGCCAGCGUACCAGC-UAGUACUGGAGUGGGAGACCCUCUGGGAGCGCUGGUUC
GCCGCCUACUC----
>Natrinema sp. 1
---UUACGG--CGGCCACAGCGGCG-AGGUACCUCCCGUACCCAUCCCGAACACGGAAGA
UAAGCUCGCCUGCGUUUCGGU-CAGUACUGGAGUGGGCGACCCUCUGGGAACCCCGAUUC
GCCGCCACCACUC--
>Haloferax
-----UUAAGGCGGCCAGAGCGGUG-AGGUUCCACCCGUACCCAUCCCGAACACGGAAGU
UAAGCUCACCUGCGUUCUGGU-CAGUACUGGAGUGAGCGAUCCUCUGGGAAAUCCAGUUC
GCCGCCCCU------
>Halobacterium
---UUAAGG--CGGCCAUAGCGGUG-GGGUUACUCCCGUACCCAUCCCGAACACGGAAGA
UAAGCCCGCCUGCGUUCCGGU-CAGUACUGGAGU--GCGAGCCUCUGGGAAAUCCGGUUC
GCCGCCUACU-----
>Haloarcula
----UUAGG--CGGCCACAGCGGUGGGGUUGCCUCCCGUACCCAUCCCGAACACGGAAGA
UAAGCCCACCAGCGUUCCGGG-GAGUACUGGAGUGCGCGAGCCUCUGGGAAACGCGGUUC
GCCGCCACC------
>Methanolobus tindarius 1
----GGUGG--CGGCCAUAGCGGCG-GGGCAAUUCCUGUACCCAUCCCGAACACAGAAGA
UAAGCCCGCCUGCGUUCUAUA-CUGUACUAAAGUAUGAGAGUCUUUGGGAAAUAUGGAAC
GCUGCCACCAAC---
>Methanosarcina
GGAGUUUGG---CGCCAUAGCGGCA-GUGUAACUCCUGUACCCAUCCCGAACACAGUAGA
UAAGCCUGCCCGCGUUCCUUA-CUGUACUGAAGUGUGCGAGCCUUCGGGAACUCUGGAUC
GCUGCCAUACUCACC
>Methanosarcina.v
--GAUCUGG--CAGCCAUAGCGGCA-GGUGUAAUCCUGUACCCAUCCCGAACACAGUAGA
UAAGCCUGCCCGCGUUCCUUGCCUGUACUGAAGUGUGCGAGC-UUCGGGAACUCUGGAUC
GUGCCAUAUCAGU--
>Streptomyces ambofaciens 1
--GUUUCGG--UGGUCAUAGCGUUA-GGGAAACGCCCGGUUACAUUCCGAACCCGGAAGC
UAAGCCUUACAGCGCCGA----UGGUACUGCAG-GGGGGACCCUGUGGGAGAGUAGG-AC
GCCGCCGAACA----
>Escherichia
--UGCCUGG--CGGCCGUAGCGCGG-UGGUCCCACCUGACCCCAUGCCGAACUCAGAAGU
GAAACGCCGUAGCGCCGA----UGGUAGUGUGG--GGUCUCCCCAUGCGAGAGUAGG-GA
ACUGCCAGGCAU---
>Flavobacterium hydatis 1
----UAAGG--UGGUUAUUGCGGCG-GGGCUCGACCUCUUCCCAUCCCGAACAGAGUAGU
UAAGCCCGCCUGCGCAGA----UGGUACUGCAGU-------UAUGUGGGAGAGUAUG-UC
GUCGCCUUUC-----
>Chlamydia trachomatis 1
----CUUGG--UGAUAAUAGAGAGA-GGGAAACACCUGACACCAUUCCGAACUCAGAAGU
UAAGCCUCUGAUCGCUGA----UGGUACUA---UACACAAGAGUAUGGGAGAGUAGG-UC
GUCGCCAAGCAU---
>Aquifex aeolicus 1
--CCCCUGG--UGGCCAUAGCGGGG-GGGAAACACCCGGUCCCAUUCCGAACCCGGCAGU
UAAGCCCCCCAGCGCCGA----UGAUACUGUG-CCGGCAGCGGCACGGGAAAGUAGG-UC
GCUGCCAGGGG----
>Thermotoga maritima 1
AUCCCCGGG--UGCCGAUACUGGGGCGGGAAACACCCGGUUCCAUUCCGAACCCGGCCGU
UAAGCCGCCCUGGGCCGA----UGGUAGUAUGG-GGGCAGCCCCAUGCGAGAGUAGG-UA
GCGCCCGGGGAU---
>Agrobacterium tumefaciens 6
-CGACCUGG--UGGUCAUCGCGGGG-CGGCUGCACCCGUUCCCUUUCCGAACACGGCCGU
GAAACGCCCCAGCGCCAA----UGGUACUUCGUCUCAAGA---CGCGGGAGAGUAGG-UC
GCUGCCAGGUCU---
>Thermus
AAUCCCCCG--UGCCCAUAGCGGCG-UGGAACCACCCGUUCCCAUUCCGAACACGGAAGU
GAAACGCGCCAGCGCCGA----UGGUACUG-GGCGGGCGACCGCCUGGGAGAGUAGG-UC
GGUGCGGGGGAU---
>Geobacillus stearothermophilus 1
----CCUAG--UGGUGAUAGCGGAG-GGGAAACACCCGUUCCCAUCCCGAACACGGAAGU
UAAGCCCUCCAGCGCCGA----UGGUAGUUGGG-GCCAGCGCCCCUGCAAGAGUAGG-UC
GCUGCUAGGC-----
>Bacillus anthracis 1
----UUUGG--UGAUGAUGGCAGAG-AGGUCACACCCGUUCCCAUACCGAACACGGAAGU
UAAGCUCUCUAGCGCCGA----UGGUAGUUGGGACCUUGUCCCUGUGAGAG---UAGGAC
GUCGCCAAGC-----
>Spirochaeta aurantia 1
----CCUGG--UGAUCAUAGCGAAG-AGGUCCCACCCGUUCCCAUCCCGAACACGGAAGU
UAAGCUCUUCAGCGCCGA----UGGUACUGCUAU---------UGCGGGAGAGUAGG-UC
GUCGCCAGGCU----
