alignment-find(1)

NAME

alignment-find - Find the last (or first) FASTA alignment in a file.

SYNOPSIS

alignment-find [OPTIONS] < in-file

DESCRIPTION

Find the last (or first) FASTA alignment in a file.

ALLOWED OPTIONS:

-h, –help
    produce help message

–alphabet arg
    Specify the alphabet: DNA, RNA, Amino-Acids, Amino-Acids+stop, Triplets, Codons, or Codons+stop.

–first
    get the first alignment in the file

–last
    get the last alignment in the file (default)

REPORTING BUGS:

BAli-Phy online help: <http://www.bali-phy.org/docs.php>.

Please send bug reports to <bali-phy-users@googlegroups.com>.

AUTHORS
Benjamin Redelings.