>Saccharomyces
GG------U----UGCGGCCAUAU-CUACC-AGA-AAG-CACCGUUCUCCGU-CCGAUCA
ACUGUAGUUAAGCUGGUAAGAG-C-CU-GACC-GAGUAGUGUAG-UGGG-UGACCAUACG
CGAAAC-UC-AG-GUGCUGC----A-A--------UCU
>Candida albicans 1
GG------U----UGCGGCCAUAU-CUAGC-AGA-AAG-CACCGUUCCCCGU-UCGAUCA
ACCGUAGUUAAGCUGCUAAGAG-C-AA-UACC-GAGUAGUGUAG-UGGG-AGACCAUACG
CGAAAC-UA-UU-GUGCUGC----A-A--------UCU
>Nosema bombycis 1
GA-----------UACGGUUAUAU-UUACU-GAA-AAC-CACCGGAACCCAU-CAGAACU
-CCGAAGUUAAACCAGUAUGAG-C-UU-A-AU-UAGUACUAAGA-AGGG-AGACCACUUG
GGAACG-UU-GG-GU-----------G--------GUA
>Zea mays 1
GG------A----UGCGAUCAUAC-CAGCA-CUA-AAG-CACCGGAUCCCAU-CAGAACU
-CCGAAGUUAAGCGUGCUUGGG-C-GA-G-AG-UAGUACUAGGA-UGGG-UGACCUCCUG
GGAAGU-CC-UC-GUGUUGC----A-U--------UCC
>Dictyostelium discoideum 1
GU------A----UACGGCCAUAC-UAGGU-UGG-AAA-CACAUCAUCCCGU-UCGAUCU
-GAUAAGUAAAUCGACCUCAGG-C-CU-U-CC-AAGUACUCUGG-UUGG-AGACAACAGG
GGAACA-UA-GG-GUGCUGU----A-U--------ACU
>Euglena
GA------G----UACGGCCAUAC-UACCG-GGA-AUA-CACCUGAACCCGU-UCGAUUU
-CAGAAGUUAAGCCGGGUUAGG-C-CC-A-GU-UAGUACUGA-G-UGGG-CGACCACUUG
GGAACA-CU-G-GGUGCUGU----A-C------G-CUU
>Cryptosporidium parvum 1
GC------A----AUCGGCCAUAC-UACAU-CGA-AUA-UACCGGAUCCCAU-CAGAACU
-CCGAAGUCAAGCGGUGUAAGG-U-UC-G-GU-UAGUACUAGGG-UGGG-GGACCACCUG
GGAAGA-CCAG-AAUGUCGA----UCG------C-CUC
>Caenorhabditis elegans 1
GC------U----UACGACCAUAU-CACGU-UGA-AUG-CACGCCAUCCCGU-CCGAUCU
-GGCAAGUUAAGCAACGUUGAG-U-CC-A-GU-UAGUACUUGGA-UCGG-AGACGGCCUG
GGAAUC-CU-GG-AUGUUGU----A-A--------GCU
>Drosophila melanogaster 1
GC------C----AACGACCAUAC-CACGC-UGA-AUA-CAUCGGUUCUCGU-CCGAUCA
-CCGAAAUUAAGCAGCGUCGGG-C-GC-G-GU-UAGUACUUAGA-UGGG-GGACCGCUUG
GGAACA-CC-G-CGUGUUGU----U-G------G-CCU
>Xenopus laevis 1
GC------C----UACGGCCAUAC-CACCC-UGA-AAG-UGCCCGAUAUCGU-CUGAUCU
-CGGAAGCCAAGCAGGGUCGGG-C-CU-G-GU-UAGUACUUGGA-UGGG-AGACCGCCUG
GGAAUA-CC-A-GGUGUCGU----A-G------G-CUU
>Cryptobranchus alleganiensis 1
GC------C----UACGGCCAUAC-CACCC-UGA-AUG-CGCCCGAUCUCGU-CUGAACU
-CAGAAGCUAAGCAGGCUUGGG-C-CU-G-GU-UAGUACUUGGA-UGGG-AGACUGCCUG
GGAAUA-CC-AG-GUGCUGU----A-G--G---C-UUU
>Homo
GU------C----UACGGCCAUAC-CACCC-UGA-ACG-CGCCCGAUCUCGU-CUGAUCU
-CGGAAGCUAAGCAGGGUCGGG-C-CU-G-GU-UAGUACUUGGA-UGGG-AGACCGCCUG
GGAAUA-CC-GG-GUGCUGU----A-G--G---C-UUU
>Gelidium amansii 1
AC------A----UUCGGCCAUAC-UAAGU-CGACAUG-UACCCGAUCCCAUCCCGAACU
-CGGAAGUCAAGUCGCUUCAGG-C-CG-G-GU-UAGUACUGAGG-UGAG-GGAUCACUCG
GGAAUC-CC-C-GGUGCCG-------A------A-UGU
>Amoebidium parasiticum 1
GG------U----UACGGCCAUAC-CUAGC-AGA-AAG-CACCCCAUCUCGU-CCGAUCU
-GGGAAGUUAAACUGCUAUGGG-C-GU-G-GU-UAGUACUGCGG-UGGG-GGACCACGCG
GGAAUA-CC-AC-GUGCUGU----A-A--------UCU
>Physarum polycephalum 1
GG------A----UGCGGCCAUAC-UAAGG-AGA-AAG-CACCUCAUCCCGU-CCGAUCU
-GAGAAGUUAAGCUCCUUCAGG-C-GU-G-GU-UAGUACUGGGG-UGGG-GGACCACCUG
GGAAUC-CC-A-CGUGCUGC----A-U------U-CUU
>Desulfurococcus mobilis 1
UGC-CC-GA----CCCGGCCAUAG-UGGCC-GGG-CAA-CACCCGGUCUCGUUUCGAACC
-CGGAAGUUAAGCCGGCC-ACG-U-CA-G-AA-CGGCCGUGAGG-UCCG-AGAGGCCUCG
-CAGCCGUU-C-UGAGCUGGGAUCG-G--G---C-ACC
>Sulfolobus
GCC-C---A----CCCGGUCACAG-UGAGC-GGG-CAA-CACCCGGACUCAUUUCGAACC
-CGGAAGUUAAGCCGCUC-ACG-U-UA-G-UG-GGGCCGUGGAU-ACCG-UGAGGAUCCG
-CAGCCCCA-C-UAAGCUGGGAU-G-G--G---U-UUU
>Methanothermobacter
GUU----------GGCGGUCAUGG-CGUGG-GGU-UUA-UACCUGAUCUCGUUUCGAUCU
-CAGUAGUUAAGUCCUGCUGCG-UUGU-G-GGUGUGUACUGCGG-UUUU-UUG-C-UGUG
GGAAGC-CC-ACUUCACUGC----C-A--G---A-CAA
>Campylobacter jejuni 3
AUG-U---C----CGUGAUUAUAC-AGAUG-UGG-AAA-CGCCUUGCUCCAUCCCGAACC
-AAGAAGCUAAGCACAUCGUGG-G--U---GA-UGAUACUACGC-CUUACUGG--CAGGG
GGAAAG-UA-G-CUCAUUGC----G-G------A-CUU
>Thermoplasma
GG------C----AACGGUCAUAG-CAGCA-GGG-AAA-CACCAGAUCCCAUUCCGAACU
-CGACGGUUAAGCCUG-CUGCGUA-UU-G-CG-UUGUACUGUAU-GCCG-CGAGGGUACG
GGAAGC-GC-AAUAUGCUGU----U-A------CCACU
>Pyrobaculum aerophilum 1
GCC-CCUAA----CCCGGCCAUAGGCGCCG-GUG-AUA-CGCCCGGUCUCAU-CAGAACC
-CGGAAGCUAAGGCCGGCGCCG-CGCU-C-GG-GAGUACUGGGC-UCCG-CGAGGGCCCG
GGAAAC-CG-G-CGUGCUGGGAG-G-G--G---G-CUU
>Nanoarchaeum equitans 1
GUU-U---CGUGGGAGGGCCAUAG-CGGCCCGGG-AAC-CACCCGUACCCAUCUCGAACA
-CGGAAGUUAAGCCGGGCCGCGUC-CC-G-AG-UGGUACUGCCC---CG-CGAAGGGGUG
GGAAGC-UC-GGG---AU---------------G-CCC
>Methanococcus
UGACA---U----AACGGUCAAAG-CGGAG-GUG-UAA-CAUCCGAUCCCAUCCCGAUCU
-CGGAAAUUAAGCCCUCCAGCG-AUUC-U-UU-AAGUACUGCUA-U--------CUAGUG
GGAACA-AA-GUGACGCCGU----U-A--G---U-CAC
>Methanothermococcus
UGAUA---U----AACGGUCAUAG-CGGAG-GAG-CCA-CAUCCGAUCCCGUCCCGAUCU
-CGGAAAUUAAGCCCUCCAGCG-AUAC-C-CU-AAGUACUGCCA-U--------UUGGUG
GGAACA-GG-GUGACGCUGU----U-G--A---U-CAC
>Archeoglobus
AUG-C---C----GACGGUCAUAG-GACGG-GGG-AAA-CACCCGGACUCAUUCCGAACC
-CGGAAGUUAAGCCCCGUUCCGUC-CC-G-CA-CAGUACUGUGU-UCCG-AGAGGGCACG
GGAACU-GC-G-GGAACCGU----C-G------G-CUU
>Methanothermus
GGU-A---C----GGCGACCAUAG-CGGGG-GGG-CCA-CACCUGAACCCGUUCCGAUCU
-CAGAAGUUAAGCCCCCCUGCG-UUGG-A-GG-UGGUACUGCAA-CGUU-AG--U-UGCG
GGAAGC-CU-CCAACGUCGC----C-G--G---C-CCA
>Pyrococcus
GGU-A---C----GGCGGUCAUAG-CGGGG-GGG-CCA-CACCCGGUCUCAUUUCGAACC
-CGGAAGUUAAGCCCCCCAGCG-AUCC-C-GG-CUGUACUGCCC-UCCG-AGAGGGGGCG
GGAACC-G--GGGACGCCGC----C-G--G-----CCA
>Thermococcus
GGU-A---C----GGCGGUCAUAG-CGGCG-GGG-UCA-CACCCGGUCUCGUUUCGACCC
-CGGAAGUUAAGCCCGCCAGCG-AUCC-C-GG-UUGUACUGCCC-UCCG-GGAGGGGGCG
GGAACC-G--GGGACGCCGC----C-G--G---C-CAC
>Methanospirillum hungatei 1
UCA-A---U----AGCGGCCACAG-CAGGU-GUG-UCA-CACCCGUUCCCAUUCCGAACA
-CGGAAGUUAAGACACCUCACG-UGGA-U-GA-CGGUACUGAGG-UACG-CGAGUCCUCG
GGAAAU-CA-UCCUCGCUGC----U-A--U---U-GUU
>Halorubrum distributum 1
GU------A----GGCGGCCAAAG-CGGCA-GGG-AAA-GACCCGUACCCAUUCCGAACA
-CGGAAGUGAAGCCUGCCAGCG-UACC-A-GC-UAGUACUGGAG-UGGG-AGACCCUCUG
GGAGCG-CU-GGUUCGCCGC----C-U--A-----CUC
>Natrinema sp. 1
UUA-----C----GGCGGCCACAG-CGGCG-AGG-UAC-CUCCCGUACCCAUCCCGAACA
-CGGAAGAUAAGCUCGCCUGCG-UUUC-G-GU-CAGUACUGGAG-UGGG-CGACCCUCUG
GGAACC-CC-GAUUCGCCGC----C-A--C--CA-CUC
>Haloferax
UUA-----A----GGCGGCCAGAG-CGGUG-AGG-UUC-CACCCGUACCCAUCCCGAACA
-CGGAAGUUAAGCUCACCUGCG-UUCU-G-GU-CAGUACUGGAG-UGAG-CGAUCCUCUG
GGAAAU-CC-AGUUCGCCGC----C----------CCU
>Halobacterium
UUA-----A----GGCGGCCAUAG-CGGUG-GGG-UUA-CUCCCGUACCCAUCCCGAACA
-CGGAAGAUAAGCCCGCCUGCG-UUCC-G-GU-CAGUACUGGAG-UGC---GAGCCUCUG
GGAAAU-CC-GGUUCGCCGC----C--------U-ACU
>Haloarcula
UU------A----GGCGGCCACAG-CGGUG-GGG-UUGCCUCCCGUACCCAUCCCGAACA
-CGGAAGAUAAGCCCACCAGCG-UUCC-G-GG-GAGUACUGGAG-UGCG-CGAGCCUCUG
GGAAAC-GC-GGUUCGCCGC----C----------ACC
>Methanolobus tindarius 1
GG------U----GGCGGCCAUAG-CGGCG-GGG-CAA-UUCCUGUACCCAUCCCGAACA
-CAGAAGAUAAGCCCGCCUGCG-UUCU-A-UA-CUGUACUAAAG-UAUG-AGAGUCUUUG
GGAAAU-AU-GGAACGCUGC----C-A--C---C-AAC
>Methanosarcina
GGAGU---U----UGGCGCCAUAG-CGGCA-GUG-UAA-CUCCUGUACCCAUCCCGAACA
-CAGUAGAUAAGCCUGCCCGCG-UUCC-U-UA-CUGUACUGAAG-UGUG-CGAGCCUUCG
GGAACU-CU-GGAUCGCUGC----C-A--UACUC-ACC
>Methanosarcina.v
GAU-C---U----GGCAGCCAUAG-CGGCA-GGU-GUA-AUCCUGUACCCAUCCCGAACA
-CAGUAGAUAAGCCUGCCCGCG-UUCCUU-GC-CUGUACUGAAG-UGUG-CGAGC-UUCG
GGAACU-CU-GGAUCG-UGC----C-AUAU---C-AGU
>Streptomyces ambofaciens 1
GUU-U---C----GGUGGUCAUAG-CGUUA-GGG-AAA-CGCCCGGUUACAUUCCGAACC
-CGGAAGCUAAGCCUUACAGCG----C-C-GA-UGGUACUGCAG--GGG-GGACCCUGUG
GGAGAG-U--AGGACGCCGC----C-G--A-----ACA
>Escherichia
UGC-C---U----GGCGGCCGUAG-CGCGG-UGG-UCC-CACCUGACCCCAUGCCGAACU
-CAGAAGUGAAACGCCGUAGCG-C----C-GA-UGGUAGUGUGG-G--G-UCUCCCCAUG
CGAGAG-U--AGGGAACUGC----C-A--G---G-CAU
>Flavobacterium hydatis 1
UA------A----GGUGGUUAUUG-CGGCG-GGG-CUC-GACCUCUUCCCAUCCCGAACA
-GAGUAGUUAAGCCCGCCUGCG-C----A-GA-UGGUACUGCAG---------UUAUGUG
GGAGAG-U--AUGUCGUCGC----C--------U-UUC
>Chlamydia trachomatis 1
CU------U----GGUGAUAAUAG-AGAGA-GGG-AAA-CACCUGACACCAUUCCGAACU
-CAGAAGUUAAGCCUCUGAUCG-C----U-GA-UGGUACUAUAC----A-CAAGAGUAUG
GGAGAG-U--AGGUCGUCGC----C-A--A---G-CAU
>Aquifex aeolicus 1
CCC-C---U----GGUGGCCAUAG-CGGGG-GGG-AAA-CACCCGGUCCCAUUCCGAACC
-CGGCAGUUAAGCCCCCCAGCG-C----C-GA-UGAUACUGUGC-C-GG-CAGCGGCACG
GGAAAG-U--AGGUCGCUGC----C-A------G-GGG
>Thermotoga maritima 1
AUC-CC-CG----GGUGCCGAUAC-UGGGGCGGG-AAA-CACCCGGUUCCAUUCCGAACC
-CGGCCGUUAAGCCGCCCUGGG-C----C-GA-UGGUAGUAUGG-G-GG-CAGCCCCAUG
CGAGAG-U--AGGUAGCGCC----C-G--G---G-GAU
>Agrobacterium tumefaciens 6
CGA-CC--U----GGUGGUCAUCG-CGGGG-CGG-CUG-CACCCGUUCCCUUUCCGAACA
-CGGCCGUGAAACGCCCCAGCG-C--C---AA-UGGUACUUCGU-CUCA-AGA--C-GCG
GGAGAG-UA-G-GUCGCUGC----C-A--G---G-UCU
>Thermus
AAU-CC-CC----CGUGCCCAUAG-CGGCG-UGG-AAC-CACCCGUUCCCAUUCCGAACA
-CGGAAGUGAAACGCGCCAGCG-C----C-GA-UGGUACUGGGC-G-GG-CGACCGCCUG
GGAGAG-U--AGGUCGGUGC----G-G--G---G-GAU
>Geobacillus stearothermophilus 1
CC------U----AGUGGUGAUAG-CGGAG-GGG-AAA-CACCCGUUCCCAUCCCGAACA
-CGGAAGUUAAGCCCUCCAGCG-C--C---GA-UGGUAGUUGGGGCCAG-CGC--CCCUG
CAAGAG-UA-G-GUCGCUGC----U-A--------GGC
>Bacillus anthracis 1
UU------U----GGUGAUGAUGG-CAGAG-AGG-UCA-CACCCGUUCCCAUACCGAACA
-CGGAAGUUAAGCUCUCUAGCG-C--C---GA-UGGUAGUUGGG-ACCU-UGU--CCCUG
UGAGAG-UA-G-GACGUCGC----C-A--------AGC
>Spirochaeta aurantia 1
CC------U----GGUGAUCAUAG-CGAAG-AGG-UCC-CACCCGUUCCCAUCCCGAACA
-CGGAAGUUAAGCUCUUCAGCG-C----C-GA-UGGUACUGCUA---------UU--GCG
GGAGAG-U--AGGUCGUCGC----C-A------G-GCU
